Jakarta
* Artha Suaka Museum
* Asmat Museum
* Bhakti 'Antara' Museum
* Bird Museum
* Cathedral Museum The Koran Museum
* Ceramics and Fine Arts Museum
* Epigraph Museum
* Heirloom Museum
* Husni Thamrin Museum
* Indonesian Central Bank Museum
* Indonesian Museum
* Indonesian Police Museum
* Indonesian Soldier Museum
* Information Museum
* Insect Museum
* Jakarta History Museum
* Komodo Museum
* Law and Judicature Museum
* Manggala Wanabakti Museum
* Maritime Museum
* Museum Adam Malik
* National Monument
* National Museum
* National Resurgence Museum
* Nri Bhakti Renatama Museum
* Puppet Museum
* Proclamation Museum
* Purna Bakti Pertiwi Museum
* Reksa Artha Museum
* Sasmitaloka A.Yani Museum
* Satria Mandala Armed Forces Museum
* Sport Museum
* Stamp Museumo Graha Widya Patra Museum
* Telecommunication Museum
* Textile Museum
* The Electric and Energy Museum
* The House/The People Consultative Assembly Museum
* The '45 Struggle Museum
* The Sacred Pancasila Museum
* The Science Centre Museum
* The Youth Pledge Museum
* Transportation Museum
* Waspada Purbawisesa Museum
Banten
* Archaeology Sites Museum Banten
West Java
Bandung * "Sri Baduga" West Java Provincial Museum
* Virajati Museum
* Soil Museum
* Bogor Struggle Museum
* Geology Museum
* Asia Afrika Museum
* Bogor Zoology Museum
* Kesepuhan Museum
* Geugusan Ulu Museum
* Etnobotany Museum
* Postal Museum
* Kalijati Museum
* Yudha Barata Museum
* Talaga Manggung Museum
* Kanoman Museum
* Cipari Site Museum
Central Java
* "Ronggowarsito" Central Java Provincial Museum
* Mangkunegara Palace Museum
* Mandala Bakti Museum
* "Isdiman" Palagan Ambarawa Museum
* Railway Museum
* The Kartini Dedication Room Museum
* The Diponegoro Dedication Room Museum
* Abdul Djalil Museum
* Bumi Putera 1912 Museum
* Jamu Jago Museum
* Sugar Museum
* Puppet Museum
* Dullah Museum
* Jamu Nyonya Meneer Museum
* Police Academy Museum
* Tosan Aji Museum
* Cigarette Museum
* Batik Museum
* Sangiran Museum
* National Press Museum
* School Museum
* Widayat Museum
* BRI (People's Bank of Indonesia) Museum
* Abirowo Museum
* Diso Museum
* Radyapustaka Museum
Yogyakarta
* Yogyakarta Special Territory Provincial Museum
* Yogyakarta Keraton Museum
* Dewantara Kirti Griya Museum
* Biology Museum
* The Yogyakarta Struggle Museum
* The Affandi Art of Painting Museum
* Diponegoro Museum
* Nyoman Gunarso Museum
* Geotechnology Mineral Museum
* Sasmita Sudirman Museum
* Dharma Wiratama Museum
* Yogyakarta Fort Museum
* Yogya Returned Museum
* Kekayon Puppet Museum
* Pura Pakualaman Museum
* Hamengkubuwono IV Museum
* Kereta Kencana Museum
* Batik Museum
East Java
* Banyuwangi Blambangan Museum No info
* Blitar Museum no info
* Kediri Airlangga Museum No info
* Lamongan Sunan Drajat Museum
* Malang Brawijaya Museum
* Nganjuk Arca Museum No info
* Ngawi Trinil Museum
* Pasuruan Jamu Ibu Prigen Museum no info
* Surabaya House of Sampoerna
* Surabaya Loka Jalasrana Museum
* Surabaya Mpu Tantular East Java Provincial Museum
* Surabaya Submarine Museum
* Surabaya WR. Soepratman Museum
* Trowulan Archaeology Museum
* Tulung Agung Balai Penyelamat Tulung Agung Museum No in
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